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    Home » Main Dishes

    Zucchini and Squash Casserole with Beef

    Modified: Jul 13, 2026 · Published: Sep 24, 2020 by Sula · This post may contain affiliate links · 40 Comments

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    Pin for Butternut squash spaghetti bake - aka spaghetti zoodles with butternut squash.
    pin for butternut squash spaghetti bake

    I love pasta, but also love it when my jeans fit. 😀 So it's always a good idea to have some pasta substitutes around for when the craving hits.

    This one uses spiralized butternut squash and zucchini baked with a simple spaghetti sauce. It's delicious!

    A serving of butternut squash and zucchini spaghetti bake on a plate with salad.

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    I'll email this post to you, so you can easily come back to it later!

    This healthy twist on a baked spaghetti casserole is also features in my master list of easy weeknight casseroles. Check it out for even more great ideas!

    Jump to:
    • Squash Zucchini Casserole Ingredients
    • How to Make Zucchini Squash Casserole
    • Best Squash Casserole Recipe Variations & Substitutions
    • How to Serve this recipe for Squash Casserole
    • Squash and Zucchini Casserole FAQs
    • 📖 Recipe

    Squash Zucchini Casserole Ingredients

    • Butternut squash noodles (fresh or frozen - about 12 oz)
    • Zucchini noodles (fresh or frozen - about 12 oz)
    • Ground beef (1 pound)
    • Olive oil (for browning beef)
    • Marinara sauce (24 oz )
    • Garlic cloves (2)
    • Shredded cheese, 2 cups (Italian cheese blend or mozzarella)
    • Seasoning: salt, pepper, Italian seasoning
    Ingredients: shredded cheese, spiralized squash, garlic, marinara sauce, ground beef, Italian seasoning, and salt and pepper.

    How to Make Zucchini Squash Casserole

    Like most casseroles, the individual pieces are cooked and then assembled. The time in the oven is very short, just long enough to melt the cheese and make it delightfully gooey. 😀

    1. Start with the ground beef. Cook it in a skillet over medium heat. Add seasonings and then continue cooking until well browned. Add in the minced garlic, then add the marinara sauce. Simmer this for 15 minutes, stirring occasionally.
    Meat and sauce simmering in a pan.
    1. In the meantime, preheat the oven and start cooking the veggies. I have used the frozen packages of spiralized vegetable noodles (so convenient!) as well as fresh. In either case, you only need to microwave the veggies briefly to pre-cook them.
    Fresh zoodles in a microwave safe dish.
    1. I recommend about 5 minutes each (add a splash of water to the fresh spirals). Once each is done, drain the excess water from the noodles before proceeding.
    2. Mix the sauce with the spiralized butternut squash and zucchini, then add in half of the shredded cheese.
    Spiralized zoodles and butternut squash noodles added to the spaghetti sauce.
    1. Transfer this mixture into a casserole dish. I used a 2 ½ quart size, but a 9x13 would work as well. Spread the rest of the shredded cheese over the top.
    Mixture placed in a casserole dish with shredded cheese on top.
    1. Bake, uncovered, for 10-15 minutes, or until cheese has melted and casserole is warmed through.
    Baked spaghetti casserole showing melted cheese on top.

    Best Squash Casserole Recipe Variations & Substitutions

    Of course, there are plenty of ways to change this up to suit your preferences, here are a few ideas:

    Marinara sauce: you can use any marinara or pasta sauce you prefer. If trying to minimize carbs, I have found Rao's to have the lowest carb count of any on the shelves. Look for the "sensitive" version for the lowest. Don't be afraid to be the nutty person reading every label in the pasta sauce aisle to compare - it's incredible how much added sugar some brands have!

    Veggie spirals: the recipe I originally found for this used 2 packages of butternut squash spirals. I like the combo of the two different types, but all squash is another way to go as well!

    In addition, many stores now carry fresh spiralized veggies. These will also work well, just be sure to cook them first according to the package instructions.

    Of course, you can always spiralize your own. I own a spiralizer and it works great for zucchini. Butternut squash? Well, let's just say it's a bit more challenging. Unless you are growing your own and simply have to do something with all your squash, I personally recommend purchasing pre-spiralized noodles to save yourself the headache. Just sayin.

    Ground beef: though I haven't tried it yet, I think pork sausage is fabulous in marinara sauce and I'm sure would be terrific in this casserole.

    What I have tried is impossible burger. You've heard of this, yes? Available at Burger King and many restaurants nationwide, Impossible burger is a meat substitute which tastes surprisingly close to the real thing. I was thrilled to find a package available at my local grocery store recently and knew I had to try it. I used it in this casserole, and it was a hit!  It made a completely delicious vegetarian butternut squash spaghetti bake. Which is quite a mouthful, but it does describe what it was. LOL

    How to Serve this recipe for Squash Casserole

    This is an all-inclusive meal: protein and veggies are covered very well. No "starch" which of course is the intent. 😀 I like to serve with a simple green salad just for a contrasting texture and taste.

    Squash and Zucchini Casserole FAQs

    How do you prevent squash casserole from being watery?

    The veggies contain a lot of moisture - especially the zucchini! Once you've pre-cooked the spiralized squash, be sure to drain it well before adding it to the baking dish.
    Also, be sure to bake the casserole uncovered, as this helps evaporate the liquid during the baking time.

    Can you make squash casserole ahead of time?

    Yes you can! Assemble the veggies, sauce, and cheese in the pan, cover and refrigerate until you're ready to cook. You may need to add a few minutes to the baking time to ensure the dish is fully heated through.

    Can you freeze squash casserole?

    Yes, you can freeze this casserole. Just bake it first and allow it to cool completely. Then wrap it well or transfer to a freezer safe airtight container. Don't forget to label it with the freeze date! Once frozen, it will keep for about 2 to 3 months.
    When you're ready to eat it, thaw it in the fridge overnight and then reheat in a 350°F oven until warmed through and the cheese is melted.

    📖 Recipe

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    Butternut squash and zoodle spaghetti bake served on a plate.
    5 from 94 votes
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    Best Squash Casserole Recipe

    Delicious spaghetti bake with spiralized veggies!
    Prep Time15 minutes mins
    Cook Time45 minutes mins
    Total Time1 hour hr
    Course: Main Course
    Cuisine: American
    Servings: 6
    Calories: 430kcal
    Author: Sula

    Video

    Ingredients

    • 12 oz butternut squash spirals fresh or frozen
    • 12 oz zucchini spirals fresh or frozen
    • 1 pound ground beef
    • 1 tablespoon olive oil for browning beef
    • 2 garlic cloves minced
    • 1 teaspoon Italian seasoning
    • ½ teaspoon salt
    • ½ teaspoon black pepper
    • 24 oz marinara sauce
    • 2 cups cheese shredded (Italian blend or Mozzarella)

    Instructions

    • Preheat oven to 350F.
    • Heat oil in a large skillet on medium heat. Add ground beef and seasonings. Cook until thoroughly browned.
      1 pound ground beef, 1 tablespoon olive oil, 1 teaspoon Italian seasoning, ½ teaspoon salt, ½ teaspoon black pepper
    • Add garlic and cook for 30-60 seconds. Then add marinara sauce and stir to incorporate.
      2 garlic cloves, 24 oz marinara sauce
    • Reduce heat and simmer 15 minutes.
    • Cook the veggie spiral packages one at a time according to package directions. Drain excess liquid from each package.
      12 oz butternut squash spirals, 12 oz zucchini spirals
    • Mix sauce and veggie spirals together in the skillet or a large bowl. Add half the shredded cheese and mix.
      2 cups cheese
    • Transfer to a 2 ½ to 3-quart casserole dish and top with remaining cheese.
    • Bake at 350F for 10-15 minutes, until casserole is warmed through and cheese is melted.

    Nutrition

    Calories: 430kcal | Carbohydrates: 16g | Protein: 25g | Fat: 30g | Saturated Fat: 14g | Cholesterol: 93mg | Sodium: 1080mg | Potassium: 964mg | Fiber: 4g | Sugar: 8g | Vitamin A: 7009IU | Vitamin C: 30mg | Calcium: 343mg | Iron: 4mg

    Nutrition values are estimates only, using online calculators. Please verify using your own data.

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    Reader Interactions

    Comments

    1. Evi

      September 16, 2022 at 12:17 pm

      5 stars
      This is such a yummy recipe. I loved how the butternut squash came out!

      Reply
      • Sula

        September 16, 2022 at 2:43 pm

        It's yummy every time!

        Reply
    2. Jessica Formicola

      September 16, 2022 at 10:43 am

      5 stars
      I love butternut squash, so this pasta was right up my alley! Thanks for sharing such a great recipe!

      Reply
      • Sula

        September 16, 2022 at 2:43 pm

        Thank you!

        Reply
    3. Tayler

      September 16, 2022 at 10:17 am

      5 stars
      I made this bake for dinner last night and my whole family loved it! Thanks so much for sharing the recipe!

      Reply
      • Sula

        September 16, 2022 at 2:43 pm

        I'm so glad your family loved it as much as mine does - thank you for the kind review!

        Reply
    4. Julia

      October 22, 2020 at 11:30 pm

      5 stars
      Love this comforting recipe with no guilt! Butternut squash is amazing!

      Reply
      • Sula

        October 23, 2020 at 6:51 am

        Isn't it? I love how it makes this all sweet and savory! And so healthy!

        Reply
    5. Cindy

      October 22, 2020 at 7:41 pm

      5 stars
      My kiddos and I made this together! We have been spending a lot more time in the kitchen lately and its so fun. They really enjoyed making this recipe but they enjoyed eating it even more! Thanks for this delish creation, we are adding it to our “make again” list!!

      Reply
      • Sula

        October 23, 2020 at 6:50 am

        Definitely perfect for kids! Spaghetti taste, with all those additional nutrients from the spiralized veggies! I'm so glad you all liked it!

        Reply
    6. Jamie

      October 22, 2020 at 7:03 pm

      5 stars
      Oh this is the perfect recipe to get out my spiralizer! I love how it uses butternut squash instead of pasta noodles. Definitely a keeper for when I'm craving something lower carb!

      Reply
      • Sula

        October 23, 2020 at 6:48 am

        Yes I love that it is lower in carbs and so healthy!

        Reply
    7. Lisa Huff

      October 22, 2020 at 6:41 pm

      5 stars
      I love that you use both the butternut squash and zucchini in this! I'm trying to eat less pasta over here so this is perfect!

      Reply
      • Sula

        October 22, 2020 at 6:55 pm

        I hope you give it a try!

        Reply
    « Older Comments
    5 from 94 votes (74 ratings without comment)

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